Reference manual

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install.packages("CNVScope")

3.7.6 by James Dalgleish, a month ago


https://github.com/jamesdalg/CNVScope/


Report a bug at https://github.com/jamesdalg/CNVScope/issues/


Browse source code at https://github.com/cran/CNVScope


Authors: James Dalgleish [aut, cre] (Alternate contact: james.dalgleish@keble.ox.ac.uk) , Yonghong Wang [aut] , Jack Zhu [aut] , Paul Meltzer [aut, sad]


Documentation:   PDF Manual  


BSD_3_clause + file LICENSE license


Imports tidyr, reshape2, magrittr, jointseg, shiny, RCurl, foreach, Matrix, OpenImageR, matrixStats, plyr, data.table, dplyr, doParallel, stringr, rtracklayer

Depends on ggplot2

Suggests knitr, remotes, pwr, ComplexHeatmap, rmarkdown, igraph, visNetwork, circlize, plotly, biomaRt, GenomicInteractions, InteractionSet, GenomicRanges, GenomicFeatures, IRanges, rslurm, shinythemes, shinycssloaders, DT, logging, heatmaply, S4Vectors, BiocManager, shinyjs, htmltools, htmlwidgets, GenomeInfoDb, BSgenome.Hsapiens.UCSC.hg19, tibble, smoothie


See at CRAN