Gibbs Samplers for Discrete Bayesian Spatiotemporal Models

Takes Poisson or Binomial discrete spatial data and runs a Gibbs sampler for a variety of Spatiotemporal Conditional Autoregressive (CAR) models. Includes measures to prevent estimate over-smoothing through a restriction of model informativeness for select models. Also provides tools to load output and get median estimates. Implements methods from Besag, York, and MolliƩ (1991) "Bayesian image restoration, with two applications in spatial statistics" , Gelfand and Vounatsou (2003) "Proper multivariate conditional autoregressive models for spatial data analysis" , Quick et al. (2017) "Multivariate spatiotemporal modeling of age-specific stroke mortality" , and Quick et al. (2021) "Evaluating the informativeness of the Besag-York-MolliƩ CAR model" .


Reference manual

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install.packages("RSTr")

1.2.0 by David DeLara, 3 months ago


https://cehi-code-repos.github.io/RSTr/


Browse source code at https://github.com/cran/RSTr


Authors: David DeLara [aut, cre] (ORCID: , Centers for Disease Control and Prevention [aut, cph] (https://ror.org/042twtr12)


Documentation:   PDF Manual  


GPL (>= 3) license


Imports abind, matrixStats, spdep

Suggests ggplot2, knitr, rmarkdown, sf, testthat

Linking to Rcpp, RcppArmadillo, RcppDist


See at CRAN