Shared C++ Backend for Approximate Bayesian Computation

Provides a compact C++ backend for Approximate Bayesian Computation (ABC) with a thin R frontend. The current implementation is primarily a C++ reimplementation of offline ABC workflows provided by the R 'abc' package , with the public R interface intentionally kept small and centered on abc() and summary() methods. The computational work is performed by shared C++ code. In addition to reproducing common 'abc' workflows, the package adds optional dimensionality reduction of summary statistics through Principal Component Analysis (PCA) and Partial Least Squares (PLS), following related ideas described by Bazin et al. (2010) and Wegmann et al. (2009) .


Reference manual

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install.packages("abcpp")

1.0.0 by Mengzhen Hu, 3 months ago


https://github.com/yuki-961004/abcpp


Report a bug at https://github.com/yuki-961004/abcpp/issues


Browse source code at https://github.com/cran/abcpp


Authors: Mengzhen Hu [aut, cre] , Katalin Csillery [ctb, cph] , Louisiane Lemaire [ctb, cph] , Olivier Francois [ctb, cph] , Michael Blum [ctb, cph]


Documentation:   PDF Manual  


GPL-3 license


Imports Rcpp

Suggests abc, testthat

Linking to Rcpp

System requirements: C++17


See at CRAN