Finding the DNA and Protein Sequences of Any Genomic or Proteomic Loci

Using the DNA sequence and gene annotation files provided in 'ENSEMBL' < https://www.ensembl.org/index.html>, the functions implemented in the package try to find the DNA sequences and protein sequences of any given genomic loci, and to find the genomic coordinates and protein sequences of any given protein locations, which are the frequent tasks in the analysis of genomic and proteomic data.


Reference manual

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install.packages("geno2proteo")

0.0.6 by Yaoyong Li, 4 years ago


Browse source code at https://github.com/cran/geno2proteo


Authors: Yaoyong Li


Documentation:   PDF Manual  


Artistic-2.0 license


Imports S4Vectors, BiocGenerics, GenomicRanges, IRanges, R.utils, RUnit

System requirements: Perl (>= 2.0.0)


See at CRAN