Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data

Convert 'Ensembl' gene identifiers from Genotype-Tissue Expression (GTEx) data to identifiers in other annotation systems, including 'Entrez', 'HGNC', and 'UniProt'.


grex

R-CMD-check CRAN Version Downloads from the RStudio CRAN mirror

grex offers a minimal dependency solution for mapping Ensembl gene IDs to Entrez IDs, HGNC gene symbols, and UniProt IDs, for Genotype-Tissue Expression (GTEx) data.

Installation

Install grex from CRAN:

install.packages("grex")

Or try the development version on GitHub:

remotes::install_github("nanxstats/grex")

See vignette("grex") for a quick-start guide.

Contribute

To contribute to this project, please take a look at the Contributing Guidelines first. Please note that the RECA project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.

Reference manual

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install.packages("grex")

1.9.1 by Nan Xiao, a year ago


https://nanx.me/grex/, https://github.com/nanxstats/grex


Report a bug at https://github.com/nanxstats/grex/issues


Browse source code at https://github.com/cran/grex


Authors: Nan Xiao [aut, cre] , Gao Wang [aut] , Lei Sun [aut]


Documentation:   PDF Manual  


GPL (>= 3) license


Suggests knitr, rmarkdown


See at CRAN