Graphs and Covariance for Landscape Genetics

Shared, dependency-light primitives for landscape-genetic network methods: a lightweight deme/landscape graph (vertex coordinates and an undirected edge list) with constructors from coordinates; genetic covariance and distance from biallelic or multiallelic data (the Yang-style normalized-dosage covariance and the Dyer-style multivariate covariance); and antisymmetric per-edge directional covariate builders (the gradient of a scalar potential, and the projection of a vector flow field). Used by 'terradish' (symmetric resistance). No compiled code.


Reference manual

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install.packages("landgraph")

0.0.3 by Bill Peterman, 11 days ago


https://github.com/wpeterman/landgraph


Report a bug at https://github.com/wpeterman/landgraph/issues


Browse source code at https://github.com/cran/landgraph


Authors: Bill Peterman [aut, cre, cph] , Nathaniel S. Pope [aut, cph]


Documentation:   PDF Manual  


BSD_3_clause + file LICENSE license


Imports stats

Suggests terra, deldir, knitr, rmarkdown, testthat


See at CRAN