Input/Output Utilities of the 'ribios' Suite

Provides data structures and functions for file input/output in the 'ribios' software suite, supporting common bioinformatics and computational biology file formats, designed for fast loading and high performance with minimal dependencies.

ribiosIO: File input/output module of the ribios suite

What is ribiosIO?

ribiosIO is a R package that file input/output operations with high performance and low latency.

Installation

ribiosIO depends on the ribiosUtils package, which should be installed first.

Run following commands in the R console.

library(devtools)
devtools::install_github("bedapub/ribiosIO")

Todo

1. Now the source files (.h and .c) are copied from ribiosUtils version 1.5-9, because to export all functions from ribiosUtils can be laborious.
   1. Solution 1: we export functions little by little
   2. Solution 2: we stay with the redundancy
   3. Solution 3: we move the C-level function to ribiosUtils, and import these functions (likely the easiest option to implement).