Client for the 'UniTCM' Traditional Chinese Medicine Platform

Provides functions to query the 'UniTCM' API (< https://unitcm.qfxulab.com>), covering herb exploration, compound/ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) data, disease-formula associations, Traditional Chinese Medicine (TCM) ontology, transcriptomics, and gene-disease analysis (MIDAS, Mining Integrated Disease Association Sources).

unitcm

unitcm is an R client for the UniTCM Traditional Chinese Medicine multi-omics platform. It provides tidy, paginated access to herbs, compounds, disease-formula associations, TCM ontology, and gene-disease analysis (MIDAS).

Installation

# install.packages("pak")
pak::pkg_install("zx122ty/UniTCM_R_Package")

Quick Start

library(unitcm)

# Search herbs
search_herbs(q = "ginseng")

# Get compound targets (DrugCLIP deep learning predictions)
get_compound_targets("1")

# Gene-disease enrichment
query_disease_enrichment(c("TP53", "BRCA1", "EGFR", "VEGFA"))

Modules

Module	Functions	Description
Herb Explorer	`search_herbs()`, `get_herb()`	800+ herbs with properties and compounds
Ingredient Explorer	`search_compounds()`, `get_compound_admet()`	50,000+ compounds with ADMET and targets
Disease-Formula Atlas	`search_formulas()`, `get_formula_doses()`	259,000+ formula-disease associations
TCM Ontology	`search_ontology()`, `export_ontology()`	Hierarchical TCM knowledge system
MIDAS	`query_gene_diseases()`, `query_disease_enrichment()`	Multi-source gene-disease analysis